Resources

Software

rfxplot

Data visualization toolbox for SPM

NaN Suite

Descriptive statistics while excluding missing data (MATLAB)

Spkie Analyzer

Visualization tool to identify (non-biological) spikes in your fMRI data

Technical Reports and How-Tos

Contrast weight tutorial

Tutorial on setting up contrast weights in (overparameterized) flexible factorial designs with multiple subjects

SPM struct

Brief explanation of the different fields in the SPM struct

Non-spericity correction

Brief explanation of the SPM approach to non-spericity correction

Recommended Textbooks

Cognitive Modeling

Lewandowsky & Farrell

2021

Computational Modeling in Cognition

"A very good introduction to cognitive modeling and the estimation of model parameter using maximum likelihood estimation. It presents important computational models in psychology (e.g. GCM for memory) and also discusses some of the important step in developing and validating cognitive models (e.g. model selection)."
Jan Gläscher
PI

Lee & Wagenmakers

2014

Bayesian Cognitive Modeling: A Practical Course

Comment

Bayesian Data Analysis / Hierarchical Modeling

Gelman et al.

2013

Bayesian Data Analysis

Comment

Kruschke

2015

Doing Bayesian Data Analysis: A Tutorial with R, JAGS, and Stan (2nd ed.)

Comment

McElreath

2015

Statistical Rethinking

Comment

Machine Learning

Bishop

2006

Pattern Recognition and Machine Learning

Comment

fMRI data analysis

Forstmann & Wagenmakers

2015

An Introduction to Model-based Cognitive Neuroscience

Comment

Huettel et al.

2015

Functional Magnetic Resonance Imaging (3rd ed.)

Comment

Friston et al.

2007

Statistical Parametric Mapping

Comment